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Summary
| Description |
A codon position is biased if the elliptical trace is: 1) not centered on the center of the (square) graph frame, and / or 2) contains a smaller-than-random volume. First position - dashed. Second position - solid. The strongest components (bias) for the encoding of anino acid residues are, in order: C in 2nd position = small size, medium hydropathy U in 2nd position = average size, hydrophobic A in 2nd position = average size, hydrophilic U in 1st position = not hydrophilic The y-axis is accurate (cubic Angstroms), but the x-axis could have some error from estimates of hydropathy. Redrawn from Figure 4 in http://www.complexity.org.au/ci/vol01/fullen01/html/ which attributes the graph to Yang, M. M., W. J. Coleman and D. C. Youvan. 1990. In Reaction Centers of Photosynthetic Bacteria. M.-E. Michel-Beyerle. (Ed.) (Springer-Verlag, Germany) p209-218; listed by Google at [1] |
| Date | |
| Source | doug youvan |
| Author | Doug Youvan |
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I, the copyright holder of this work, release this work into the public domain. This applies worldwide. In some countries this may not be legally possible; if so: I grant anyone the right to use this work for any purpose, without any conditions, unless such conditions are required by law. |
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| Date/Time | Thumbnail | Dimensions | User | Comment | |
|---|---|---|---|---|---|
| current | 00:10, 31 May 2008 | | 775 × 651 (56 KB) | Doug youvan | {{Information |Description=A codon position is biased if the elliptical trace is: 1) not centered on the center of the (square) graph frame, and / or 2) contains a smaller-than-random volume. First position - dashed. Second position - solid. See: http:/ |
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