File:Phylogenetic reconciliation events costs.svg

Original file (SVG file, nominally 215 × 190 pixels, file size: 22 KB)

Summary

Description
English: With the transfer event, D,T and L events must be assigned costs to define most parsimonious reconciliation. Different costs give different most parsimonious solutions. In the top case, D is assigned a cost of 1, T of 3 and L of 1, and if we look at the number of events in the proposed scenario we find 1 duplication and 1 loss, so a cost of 2. If we compute that cost again with the bottom cost assignment we have a scenario cost of 3. With that new cost assignment the bottom scenario is more parsimonious as its cost is 2, while it had a cost of 3 with the top cost assignment.
Date
Source Own work
Author Hugo Menet

Licensing

I, the copyright holder of this work, hereby publish it under the following license:
w:en:Creative Commons
attribution
This file is licensed under the Creative Commons Attribution 4.0 International license.
You are free:
  • to share – to copy, distribute and transmit the work
  • to remix – to adapt the work
Under the following conditions:
  • attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.

Captions

In phylogenetic reconciliation different costs assignement can give different most parsimonious solution.

Items portrayed in this file

depicts

18 May 2021

image/svg+xml

File history

Click on a date/time to view the file as it appeared at that time.

Date/TimeThumbnailDimensionsUserComment
current12:34, 29 March 2022Thumbnail for version as of 12:34, 29 March 2022215 × 190 (22 KB)HmenetUploaded own work with UploadWizard

The following page uses this file:

Metadata