The 2006 International League season took place from April to September 2006.
The Toledo Mud Hens defeated the Rochester Red Wings to win the league championship, also known as the Governor's Cup Finals.
- Buffalo - 607,929
- Charlotte - 306,408
- Columbus - 518,875
- Durham - 507,547
- Indianapolis - 547,768
- Louisville - 652,692
- Norfolk - 463,769
- Ottawa - 122,574
- Pawtucket - 613,065
- Richmond - 321,696
- Rochester - 476,734
- Scranton/W.B. - 381,179
- Syracuse - 347,699
- Toledo - 606,457
The Toledo Mud Hens and Indianapolis Indians finish in a tie for the IL West Division they had to play a play-in game the Mud Hens win with a score of 4–0 to win the division title to clinch a spot in Governor's Cup playoffs.
Scranton/Wilkes-Barre Red Barons vs Rochester Red Wings
Rochester won the series, 3–1.
| Game |
Date |
Team |
Score |
Location
|
| 1 |
September 6 |
Scranton/Wilkes-Barre at Rochester |
6–5 |
Innovative Field
|
| 2 |
September 7 |
Scranton/Wilkes-Barre at Rochester |
11–5 |
Innovative Field
|
| 3 |
September 8 |
Rochester at Scranton/Wilkes-Barre |
6–3 |
PNC Field
|
| 4 |
September 9 |
Rochester at Scranton/Wilkes-Barre |
2–0 |
PNC Field
|
Charlotte Knights vs Toledo Mud Hens
Toledo won the series, 3–1.
| Game |
Date |
Team |
Score |
Location
|
| 1 |
September 6 |
Charlotte at Toledo |
5–0 |
Fifth Third Field
|
| 2 |
September 7 |
Charlotte at Toledo |
6–2 |
Fifth Third Field
|
| 3 |
September 8 |
Toledo at Charlotte |
6–2 |
Knights Stadium
|
| 4 |
September 9 |
Toledo at Charlotte |
5–2 |
Knights Stadium
|
Governor's Cup Finals
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Rochester Red Wings vs Toledo Mud Hens
Toledo won the series, 3–2.
| Game |
Date |
Team |
Score |
Location
|
| 1 |
September 12 |
Toledo at Rochester |
6–3 |
Innovative Field
|
| 2 |
September 13 |
Toledo at Rochester |
6–1 |
Innovative Field
|
| 3 |
September 14 |
Rochester at Toledo |
10–4 |
Fifth Third Field
|
| 4 |
September 15 |
Rochester at Toledo |
6–0 |
Fifth Third Field
|
| 5 |
September 16 |
Rochester at Toledo |
10–1 |
Fifth Third Field
|
Toledo lost to Tucson Sidewinders in the first ever Triple-A National Championship Game by the score of 5–2.
| Semifinals
| | | Governor's Cup Finals
| |
| | | | | | | | | |
| N1
| Scranton/Wilkes-Barre Red Barons
| 1
| | |
|
| WC
| Rochester Red Wings
| 3
| |
| | WC
| Rochester Red Wings
| 2
| |
|
| |
| | | W1
| Toledo Mud Hens
| 3
| |
| S1
| Charlotte Knights
| 1
| |
| |
| W1
| Toledo Mud Hens
| 3
| |
