In bioinformatics, The Green Non-Coding Database, GreeNC, is a biological database that acts as an archive of plant lncRNAs and annotations.[1] Started on 2015, the GreeNC database provides information on sequence, genome coordinates, coding potential and folding energy of lncRNAs. GreeNC includes about 200.000 pages with information on more than 190.000 transcripts from 37 plants and six algae. According to Paytuví and collaborators,[1] by using the same pipeline to annotate lncRNAs GreeNC make it possible to compare lncRNA sequences and distribution from different species.

GreeNC
Content
Descriptionplant lncRNA annotation and sequences
Data types
captured
provide a tool for the scientific community that can boost the research on lncRNAs
OrganismsPlants and algae
Contact
Research centerSequentia Biotech
AuthorsAndreu Paytuvi Gallart; Antonio Hermoso Pulido; Irantzu Anzar Martinez de Lagran; Walter Sanseverino; Riccardo Aiese Cigliano
Primary citationdoi:10.1093/nar/gkv1215
Release date2015
Access
Websitehttp://greenc.sciencedesigners.com/wiki/Main_Page

References

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  1. ^ a b Paytuví Gallart, Andreu; Hermoso Pulido, Antonio; Anzar Martínez de Lagrán, Irantzu; Sanseverino, Walter; Aiese Cigliano, Riccardo (4 January 2016). "GREENC: a Wiki-based database of plant lncRNAs". Nucleic Acids Research. 44 (D1): D1161–D1166. doi:10.1093/nar/gkv1215. PMC 4702861. PMID 26578586.
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