LHFPL1

Lipoma HMGIC fusion partner-like 1 protein is a protein that in humans is encoded by the LHFPL1 gene.

LHFPL1
Identifiers
Aliases	LHFPL1, lipoma HMGIC fusion partner-like 1, lipoma HMGIC fusion partner like 1, LHFPL tetraspan subfamily member 1
External IDs	OMIM: 300566; MGI: 1891214; HomoloGene: 18653; GeneCards: LHFPL1; OMA:LHFPL1 - orthologs
Gene location (Human) Chr. X chromosome (human) Band Xq23 Start 112,630,648 bp End 112,680,054 bp
Gene location (Mouse) Chr. X chromosome (mouse) Band X|X F2 Start 144,073,355 bp End 144,132,085 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in testicle gonad nucleus accumbens left coronary artery right coronary artery caudate nucleus Descending thoracic aorta putamen hypothalamus substantia nigra Top expressed in zygote secondary oocyte esophagus embryo lip primary oocyte embryo genital tubercle zone of skin spinal ganglia More reference expression data BioGPS More reference expression data
Orthologs Species Human Mouse Entrez 340596 237091 Ensembl ENSG00000182508 ENSMUSG00000041700 UniProt Q86WI0 Q80SV1 RefSeq (mRNA) NM_178175 NM_178358 RefSeq (protein) NP_835469 NP_848135 Location (UCSC) Chr X: 112.63 – 112.68 Mb Chr X: 144.07 – 144.13 Mb PubMed search
Wikidata
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This gene is a member of the lipoma HMGIC fusion partner (LHFP) gene family, which is a subset of the superfamily of tetraspan transmembrane protein encoding genes. Mutations in one LHFP-like gene result in deafness in humans and mice, and a second LHFP-like gene is fused to a high-mobility group gene in a translocation-associated lipoma. Alternatively spliced transcript variants have been found, but their biological validity has not been determined.

Further reading

• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
• Longo-Guess CM, Gagnon LH, Cook SA, et al. (2005). "A missense mutation in the previously undescribed gene Tmhs underlies deafness in hurry-scurry (hscy) mice". Proc. Natl. Acad. Sci. U.S.A. 102 (22): 7894–9. Bibcode:2005PNAS..102.7894L. doi:10.1073/pnas.0500760102. PMC 1142366. PMID 15905332.
• Huang C, Guo J, Liu S, et al. (2005). "Isolation, tissue distribution and prokaryotic expression of a novel human X-linked gene LHFPL1". DNA Seq. 15 (4): 299–302. doi:10.1080/10425170412331279620. PMID 15620218. S2CID 22859348.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Clark HF, Gurney AL, Abaya E, et al. (2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC 403697. PMID 12975309.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Hillier LD, Lennon G, Becker M, et al. (1997). "Generation and analysis of 280,000 human expressed sequence tags". Genome Res. 6 (9): 807–28. doi:10.1101/gr.6.9.807. PMID 8889549.