User:ProteinBoxBot/PBB Log Wiki 12-20-2007-DECS-11

Log page index: User:ProteinBoxBot/PBB_Log_Index

Protein Status Quick Log - Date: 21:10, 20 December 2007 (UTC)

edit

Proteins with a High Potential Match (1)

edit
GMNN

Redirected Proteins (11)

edit
PAK1 ZNF593 POP5 EXOSC3 HSPA14
POLR1D PBX1 PCNA OTX2 PAK3
PA2G4

Created (5)

edit
ZNF593 POP5 EXOSC3 HSPA14 POLR1D

Manual Inspection (Page not found) (1)

edit
GMNN

Updated (6)

edit
PAK1 PBX1 PCNA OTX2 PAK3
PA2G4


Protein Status Grid - Date: 21:10, 20 December 2007 (UTC)

edit
HUGO Symbol Action Summary Target page(s) WP Symbol Search
PAK1 Updated Location: PAK1; [1]
ZNF593 Created Location: ZNF593; [2]
POP5 Created Location: POP5; [3]
EXOSC3 Created Location: EXOSC3; [4]
HSPA14 Created Location: HSPA14; [5]
GMNN Manual Inspection (Page not found) Other Pages: Geminin (Protein Template); GMNN (No Data); Gem (DisAmbig); RP3-369A17.3 (No Data); Rp3-369a17.3 (No Data); [6]
POLR1D Created Location: POLR1D; [7]
PBX1 Updated Location: PBX1; [8]
PCNA Updated Location: PCNA; [9]
OTX2 Updated Location: OTX2; [10]
PAK3 Updated Location: PAK3; [11]
PA2G4 Updated Location: PA2G4; [12]

Vebose Log - Date: 21:10, 20 December 2007 (UTC)

edit
  • INFO: Beginning work on EXOSC3... {December 20, 2007 1:07:11 PM PST}
  • UPLOAD: Added new Image to wiki: File:PBB Protein EXOSC3 image.jpg {December 20, 2007 1:07:56 PM PST}
  • REDIRECT: Protein Redirected to: EXOSC3 {December 20, 2007 1:08:03 PM PST}
  • CREATED: Created new protein page: EXOSC3 {December 20, 2007 1:08:12 PM PST}
  • INFO: Beginning work on GMNN... {December 20, 2007 1:09:02 PM PST}
  • REDIRECT: Page directory gave bad page (Geminin). Continuing with search.. Please correct entry: <51053,Geminin>. {December 20, 2007 1:09:20 PM PST}
  • AMBIGUITY: Did not locate an acceptable page to update. {December 20, 2007 1:09:31 PM PST}
 <!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{PBB_Controls
| update_page = yes 
| require_manual_inspection = no 
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}

<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
 | image = PBB_Protein_GMNN_image.jpg
 | image_source = [[Protein_Data_Bank|PDB]] rendering based on 1t6f.
 | PDB = {{PDB2|1t6f}}, {{PDB2|1uii}}
 | Name = Geminin, DNA replication inhibitor
 | HGNCid = 17493
 | Symbol = GMNN
 | AltSymbols =; Gem; RP3-369A17.3
 | OMIM = 602842
 | ECnumber =  
 | Homologene = 9292
 | MGIid = 1927344
 | GeneAtlas_image1 = PBB_GE_GMNN_218350_s_at_tn.png
 | Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} 
 | Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} 
 | Process = {{GNF_GO|id=GO:0007049 |text = cell cycle}} {{GNF_GO|id=GO:0008156 |text = negative regulation of DNA replication}} {{GNF_GO|id=GO:0009887 |text = organ morphogenesis}} {{GNF_GO|id=GO:0045786 |text = negative regulation of progression through cell cycle}} 
 | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 51053
    | Hs_Ensembl = ENSG00000112312
    | Hs_RefseqProtein = NP_056979
    | Hs_RefseqmRNA = NM_015895
    | Hs_GenLoc_db =  
    | Hs_GenLoc_chr = 6
    | Hs_GenLoc_start = 24883138
    | Hs_GenLoc_end = 24894306
    | Hs_Uniprot = O75496
    | Mm_EntrezGene = 57441
    | Mm_Ensembl = ENSMUSG00000006715
    | Mm_RefseqmRNA = NM_020567
    | Mm_RefseqProtein = NP_065592
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr = 13
    | Mm_GenLoc_start = 24759311
    | Mm_GenLoc_end = 24769328
    | Mm_Uniprot = Q5SZV9
  }}
}}
'''Geminin, DNA replication inhibitor''', also known as '''GMNN''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: GMNN geminin, DNA replication inhibitor| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=51053| accessdate = }}</ref>

<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title = 
| summary_text = 
}}

==References==
{{reflist}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading 
| citations = 
*{{cite journal  | author=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. |journal=Gene |volume=138 |issue= 1-2 |pages= 171-4 |year= 1994 |pmid= 8125298 |doi=  }}
*{{cite journal  | author=Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, ''et al.'' |title=Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. |journal=Gene |volume=200 |issue= 1-2 |pages= 149-56 |year= 1997 |pmid= 9373149 |doi=  }}
*{{cite journal  | author=McGarry TJ, Kirschner MW |title=Geminin, an inhibitor of DNA replication, is degraded during mitosis. |journal=Cell |volume=93 |issue= 6 |pages= 1043-53 |year= 1998 |pmid= 9635433 |doi=  }}
*{{cite journal  | author=Kroll KL, Salic AN, Evans LM, Kirschner MW |title=Geminin, a neuralizing molecule that demarcates the future neural plate at the onset of gastrulation. |journal=Development |volume=125 |issue= 16 |pages= 3247-58 |year= 1998 |pmid= 9671596 |doi=  }}
*{{cite journal  | author=Wohlschlegel JA, Dwyer BT, Dhar SK, ''et al.'' |title=Inhibition of eukaryotic DNA replication by geminin binding to Cdt1. |journal=Science |volume=290 |issue= 5500 |pages= 2309-12 |year= 2001 |pmid= 11125146 |doi= 10.1126/science.290.5500.2309 }}
*{{cite journal  | author=Bermejo R, Vilaboa N, Calés C |title=Regulation of CDC6, geminin, and CDT1 in human cells that undergo polyploidization. |journal=Mol. Biol. Cell |volume=13 |issue= 11 |pages= 3989-4000 |year= 2003 |pmid= 12429841 |doi= 10.1091/mbc.E02-04-0217 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | author=Biswas N, Sanchez V, Spector DH |title=Human cytomegalovirus infection leads to accumulation of geminin and inhibition of the licensing of cellular DNA replication. |journal=J. Virol. |volume=77 |issue= 4 |pages= 2369-76 |year= 2003 |pmid= 12551974 |doi=  }}
*{{cite journal  | author=Kulartz M, Kreitz S, Hiller E, ''et al.'' |title=Expression and phosphorylation of the replication regulator protein geminin. |journal=Biochem. Biophys. Res. Commun. |volume=305 |issue= 2 |pages= 412-20 |year= 2003 |pmid= 12745091 |doi=  }}
*{{cite journal  | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal  | author=Del Bene F, Tessmar-Raible K, Wittbrodt J |title=Direct interaction of geminin and Six3 in eye development. |journal=Nature |volume=427 |issue= 6976 |pages= 745-9 |year= 2004 |pmid= 14973488 |doi= 10.1038/nature02292 }}
*{{cite journal  | author=Luo L, Yang X, Takihara Y, ''et al.'' |title=The cell-cycle regulator geminin inhibits Hox function through direct and polycomb-mediated interactions. |journal=Nature |volume=427 |issue= 6976 |pages= 749-53 |year= 2004 |pmid= 14973489 |doi= 10.1038/nature02305 }}
*{{cite journal  | author=Sugimoto N, Tatsumi Y, Tsurumi T, ''et al.'' |title=Cdt1 phosphorylation by cyclin A-dependent kinases negatively regulates its function without affecting geminin binding. |journal=J. Biol. Chem. |volume=279 |issue= 19 |pages= 19691-7 |year= 2004 |pmid= 14993212 |doi= 10.1074/jbc.M313175200 }}
*{{cite journal  | author=Melixetian M, Ballabeni A, Masiero L, ''et al.'' |title=Loss of Geminin induces rereplication in the presence of functional p53. |journal=J. Cell Biol. |volume=165 |issue= 4 |pages= 473-82 |year= 2004 |pmid= 15159417 |doi= 10.1083/jcb.200403106 }}
*{{cite journal  | author=Ramachandran N, Hainsworth E, Bhullar B, ''et al.'' |title=Self-assembling protein microarrays. |journal=Science |volume=305 |issue= 5680 |pages= 86-90 |year= 2004 |pmid= 15232106 |doi= 10.1126/science.1097639 }}
*{{cite journal  | author=Ballabeni A, Melixetian M, Zamponi R, ''et al.'' |title=Human geminin promotes pre-RC formation and DNA replication by stabilizing CDT1 in mitosis. |journal=EMBO J. |volume=23 |issue= 15 |pages= 3122-32 |year= 2005 |pmid= 15257290 |doi= 10.1038/sj.emboj.7600314 }}
*{{cite journal  | author=Saxena S, Yuan P, Dhar SK, ''et al.'' |title=A dimerized coiled-coil domain and an adjoining part of geminin interact with two sites on Cdt1 for replication inhibition. |journal=Mol. Cell |volume=15 |issue= 2 |pages= 245-58 |year= 2004 |pmid= 15260975 |doi= 10.1016/j.molcel.2004.06.045 }}
*{{cite journal  | author=Zhu W, Chen Y, Dutta A |title=Rereplication by depletion of geminin is seen regardless of p53 status and activates a G2/M checkpoint. |journal=Mol. Cell. Biol. |volume=24 |issue= 16 |pages= 7140-50 |year= 2004 |pmid= 15282313 |doi= 10.1128/MCB.24.16.7140-7150.2004 }}
*{{cite journal  | author=Kulartz M, Knippers R |title=The replicative regulator protein geminin on chromatin in the HeLa cell cycle. |journal=J. Biol. Chem. |volume=279 |issue= 40 |pages= 41686-94 |year= 2004 |pmid= 15284237 |doi= 10.1074/jbc.M405798200 }}
}}
{{refend}}

{{protein-stub}}
 
  • INFO: Beginning work on HSPA14... {December 20, 2007 1:10:25 PM PST}
  • REDIRECT: Protein Redirected to: HSPA14 {December 20, 2007 1:11:08 PM PST}
  • CREATED: Created new protein page: HSPA14 {December 20, 2007 1:11:17 PM PST}
  • INFO: Beginning work on OTX2... {December 20, 2007 1:03:50 PM PST}
  • REDIRECT: Protein Redirected to: OTX2 {December 20, 2007 1:04:11 PM PST}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {December 20, 2007 1:04:12 PM PST}
  • UPDATE SUMMARY: Updating Summary, No Errors. {December 20, 2007 1:04:12 PM PST}
  • UPDATE CITATIONS: Updating Citations, No Errors. {December 20, 2007 1:04:12 PM PST}
  • UPDATED: Updated protein page: OTX2 {December 20, 2007 1:04:18 PM PST}
  • INFO: Beginning work on PA2G4... {December 20, 2007 1:04:18 PM PST}
  • REDIRECT: Protein Redirected to: PA2G4 {December 20, 2007 1:04:39 PM PST}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {December 20, 2007 1:04:42 PM PST}
  • UPDATE SUMMARY: Updating Summary, No Errors. {December 20, 2007 1:04:42 PM PST}
  • UPDATE CITATIONS: Updating Citations, No Errors. {December 20, 2007 1:04:42 PM PST}
  • UPDATED: Updated protein page: PA2G4 {December 20, 2007 1:04:48 PM PST}
  • INFO: Beginning work on PAK1... {December 20, 2007 1:04:48 PM PST}
  • REDIRECT: Protein Redirected to: PAK1 {December 20, 2007 1:05:39 PM PST}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {December 20, 2007 1:05:40 PM PST}
  • UPDATE SUMMARY: Updating Summary, No Errors. {December 20, 2007 1:05:40 PM PST}
  • UPDATE CITATIONS: Updating Citations, No Errors. {December 20, 2007 1:05:40 PM PST}
  • UPDATED: Updated protein page: PAK1 {December 20, 2007 1:05:47 PM PST}
  • INFO: Beginning work on PAK3... {December 20, 2007 1:05:47 PM PST}
  • REDIRECT: Protein Redirected to: PAK3 {December 20, 2007 1:06:07 PM PST}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {December 20, 2007 1:06:08 PM PST}
  • UPDATE SUMMARY: Updating Summary, No Errors. {December 20, 2007 1:06:08 PM PST}
  • UPDATE CITATIONS: Updating Citations, No Errors. {December 20, 2007 1:06:08 PM PST}
  • UPDATED: Updated protein page: PAK3 {December 20, 2007 1:06:15 PM PST}
  • INFO: Beginning work on PBX1... {December 20, 2007 1:06:15 PM PST}
  • REDIRECT: Protein Redirected to: PBX1 {December 20, 2007 1:06:31 PM PST}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {December 20, 2007 1:06:33 PM PST}
  • UPDATE SUMMARY: Updating Summary, No Errors. {December 20, 2007 1:06:33 PM PST}
  • UPDATE CITATIONS: Updating Citations, No Errors. {December 20, 2007 1:06:33 PM PST}
  • UPDATED: Updated protein page: PBX1 {December 20, 2007 1:06:40 PM PST}
  • INFO: Beginning work on PCNA... {December 20, 2007 1:06:40 PM PST}
  • REDIRECT: Protein Redirected to: PCNA {December 20, 2007 1:07:01 PM PST}
  • UPDATE PROTEIN BOX: Updating Protein Box, No errors. {December 20, 2007 1:07:03 PM PST}
  • UPDATE SUMMARY: Updating Summary, No Errors. {December 20, 2007 1:07:03 PM PST}
  • UPDATE CITATIONS: Updating Citations, No Errors. {December 20, 2007 1:07:03 PM PST}
  • UPDATED: Updated protein page: PCNA {December 20, 2007 1:07:11 PM PST}
  • INFO: Beginning work on POLR1D... {December 20, 2007 1:09:31 PM PST}
  • REDIRECT: Protein Redirected to: POLR1D {December 20, 2007 1:10:16 PM PST}
  • CREATED: Created new protein page: POLR1D {December 20, 2007 1:10:25 PM PST}
  • INFO: Beginning work on POP5... {December 20, 2007 1:11:17 PM PST}
  • REDIRECT: Protein Redirected to: POP5 {December 20, 2007 1:11:50 PM PST}
  • CREATED: Created new protein page: POP5 {December 20, 2007 1:11:59 PM PST}
  • INFO: Beginning work on ZNF593... {December 20, 2007 1:08:12 PM PST}
  • UPLOAD: Added new Image to wiki: File:PBB Protein ZNF593 image.jpg {December 20, 2007 1:08:46 PM PST}
  • REDIRECT: Protein Redirected to: ZNF593 {December 20, 2007 1:08:54 PM PST}
  • CREATED: Created new protein page: ZNF593 {December 20, 2007 1:09:02 PM PST}

end log.